BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023D04SP1|AL428040
(575 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 1088 0.0
>3x_Contig1619
Length = 7770
Score = 1088 bits (542), Expect = 0.0
Identities = 563/576 (97%), Gaps = 2/576 (0%)
Strand = Plus / Minus
Query: 1 gggaggagccgcggggtttataaattttattagtagatttaggtaaatcatataataaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2262 gggaggagccgcggggtttataaattttattagtagatttaggtaaatcatataataaac 2203
Query: 61 tattatcaggagttcaatttaaaatagtatcttgaatagccttcattaaatcttccccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2202 tattatcaggagttcaatttaaaatagtatcttgaatagccttcattaaatcttccccgc 2143
Query: 121 ggtctccccccgaag--aggagccgcgggtgaatttatatgttgagatacttctaaactt 178
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2142 ggtctccccccgaagggaggagccgcgggtgaatttatatgttgagatacttctaaactt 2083
Query: 179 attttatagttattgtttatatttttagaaatagctaaatgaccttcagcttcgataaat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2082 attttatagttattgtttatatttttagaaatagctaaatgaccttcagcttcgataaat 2023
Query: 239 cctacaatatattcaatattaattttagaaataatatcatcatattccccgcscsgctcg 298
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 2022 cctacaatatattcaatattaattttagaaataatatcatcatattccccgcgcggctcg 1963
Query: 299 ccctaccctacggtagggcgatgccgcgcgggggggagtatggtttgaagaattagtatt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1962 ccctaccctacggtagggcgatgccgcgcgggggggagtatggtttgaagaattagtatt 1903
Query: 359 taattcttcatttaatttattacataattctaatttaatatttttagaaattgtagaatc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1902 taattcttcatttaatttattacataattctaatttaatatttttagaaattgtagaatc 1843
Query: 419 actagtagataatttatatattamtmmtmyyccccgcggctactttcaatactggaggta 478
||||||||||||||||||||||| | | | |||||||||||||||||||||||||||
Sbjct: 1842 actagtagataatttatatattaataatattcnccgcggctactttcaatactggaggta 1783
Query: 479 gccgcggggtttgtttatattathmtcctgcgcgacatcacccaaccctagggttgggtg 538
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1782 gccgcggggtttgtttatattataatcctgcgcgacatcacccaaccctagggttgggtg 1723
Query: 539 atgtcacatttgcagggaagagtaattcttgataat 574
||||||||||||||||||||||||||||||||||||
Sbjct: 1722 atgtcacatttgcagggaagagtaattcttgataat 1687
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4790
Number of Sequences: 1807
Number of extensions: 4790
Number of successful extensions: 148
Number of sequences better than 1.0e-20: 1
length of query: 575
length of database: 10,358,551
effective HSP length: 16
effective length of query: 559
effective length of database: 10,329,639
effective search space: 5774268201
effective search space used: 5774268201
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)